Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917123.1_cds_XP_016466778.1_59595
CDS Infomation

[gene=LOC107789472] [db_xref=GeneID:107789472] [protein=glutamate decarboxylase-like] [protein_id=XP_016466778.1] [location=join(39606..39899,40709..40909,41258..41726,41855..41907,42276..42767)] [gbkey=CDS]
Sequence

ATGGTGGTAACAACAACGTCGATTAGTGACTCAAACGAGAACTTGCACTGTACATTTGCG
TCAAGATATGTACAAGAATCTTTACCTAAGTTCAAGATCCCAGACAGGTCCATGCCTAAG
GAAGCCGCTTTTCAGATTGTTAACGACGAGCTTATGTTGGACGGTAACCCAAGATTGAAT
TTAGCCTCCTTTGTTAGCACGTGGATGGAGCCCGAGTGCGATAAGCTTATCATGTCTTCC
ATTAATAAGAACTATGTTGACATGGATGAGTACCCTGTTACCACTGAACTTCAGAATCGG
TGTGTTAACATGTTAGCACATCTTTTCCATGCTCCAGTTGGTGACGATGAAACCGCAATA
GGAGTTGGTACAGTGGGTTCATCAGAGGCAATCATGCTTGCTGGCCTTGCTTTCAAACGC
AAATGGCAGGCTAGAAGAAAAGCAGAAGGCAAACCTTTCGATAAGCCTAATATAGTGACT
GGAGCTAATGTGCAGGTCTGCTGGGAAAAATTTGCAAGGTACTTTGAGGTTGAATTGAAG
GAGGTGAAATTAAAAGAAGGATACTATGTAATGGACCCTGCTAAAGCAGTTGAGATGGTA
GATGAGAATACAATATGTGTAGCTGCAATTCTTGGTTCCACCCTGACTGGGGAATTTGAG
GATGTGAAGCTCCTTAACGAGCTCCTCTCTAAAAAGAACAAGGAAACTGGATGGGATACA
CCGATCCATGTTGATGCCGCCAGTGGAGGATTTATTGCTCCTTTCCTGTGGCCAGATCTT
GAATGGGATTTCCGCTTGCCTCTGGTGAAAAGTATAAATGTCAGTGGTCACAAGTATGGC
CTTGTATATGCTGGTGTTGGTTGGGTAATATGGCGGAGCAAGGAAGATTTGCCCGAGGAG
CTCGTGTTTCATATAAATTACCTCGGATCTGATCAGCCTACTTTTACTCTCAACTTCTCT
AAAGGTTCCTATCAAATAATTGCCCAGTATTATCAGTTAATAAGACTTGGCTTTCAGGGT
TATAAGAGCATCATGGAGAATTGCATGGCAAATGCAAAAGTACTAACGGATGGAATCACA
AAAATGGGGCGGTTCGATATCGTCTCTAAGGATGTAGGCGTGCCTGTAGTAGCATTTTCT
CTGAGGGACAGCAGCAAATATACAGTGTTTGAAGTGTCTGAGCATCTCAGAAGATTCGGA
TGGATTGTCCCAGCATACACCATGCCACCAGATGCTGAACACGTTGCTGTTCTGCGTGTT
GTAATCAGAGAGGATTTCAGCCACAGCCTAGCAGAGAGACTTGTAGCCGACATTGAGAAT
GTTCTGAAAGAGTTAGATACGCATCCACCTCGCTTACCCACAAAGGCTGCCCGTGTCACT
GCGGAGAAAGTGCATAATGATAAGGGTGATGGGCTTCATCAGTTTCACACAGATATTGTA
GAGACTCAGAAAGACATAGTCAAGCATTGGAGGAAAATAGCAGGGAAGAAGACCAGCGGA
GTCTGTTAG

Peptide Sequence

PEP ID

XP_016466778.1
PEP Infomation

PREDICTED: glutamate decarboxylase-like [Nicotiana tabacum]
Sequence

MVVTTTSISDSNENLHCTFASRYVQESLPKFKIPDRSMPKEAAFQIVNDELMLDGNPRLN
LASFVSTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAI
GVGTVGSSEAIMLAGLAFKRKWQARRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELK
EVKLKEGYYVMDPAKAVEMVDENTICVAAILGSTLTGEFEDVKLLNELLSKKNKETGWDT
PIHVDAASGGFIAPFLWPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDLPEE
LVFHINYLGSDQPTFTLNFSKGSYQIIAQYYQLIRLGFQGYKSIMENCMANAKVLTDGIT
KMGRFDIVSKDVGVPVVAFSLRDSSKYTVFEVSEHLRRFGWIVPAYTMPPDAEHVAVLRV
VIREDFSHSLAERLVADIENVLKELDTHPPRLPTKAARVTAEKVHNDKGDGLHQFHTDIV
ETQKDIVKHWRKIAGKKTSGVC

Transcript Sequence

Gene sequence data has not been registered.